Krushkal, Julia: search on Z-Library

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1

Computational Analysis of the Evolution of 1-Deoxy-D-xylulose-5-phosphate Reductoisomerase, an Important Enzyme in Plant Terpene Biosynthesis

Pui Kwan Fung, Julia Krushkal, Pamela J. Weathers

Journal:

Chemistry & Biodiversity

Year:

2010

Language:

english

File:

PDF, 728 KB

english, 2010

2

Association of Birth Weight with Polymorphisms in the IGF2, H19 and IGF2R Genes

Adkins, Ronald M, Somes, Grant, Morrison, John C., Hill, James B., Watson, Erin M., Magann, Everett F., Krushkal, Julia

Journal:

Pediatric Research

Year:

2010

Language:

english

File:

PDF, 327 KB

english, 2010

3

Exposure time versus cytotoxicity for anticancer agents

Evans, David M., Fang, Jianwen, Silvers, Thomas, Delosh, Rene, Laudeman, Julie, Ogle, Chad, Reinhart, Russell, Selby, Michael, Bowles, Lori, Connelly, John, Harris, Erik, Krushkal, Julia, Rubinstein,

Journal:

Cancer Chemotherapy and Pharmacology

Year:

2019

Language:

english

File:

PDF, 4.49 MB

english, 2019

4

Newborn Umbilical Cord Blood DNA Methylation and Gene Expression Levels Exhibit Limited Association with Birth Weight

Ronald M. Adkins, Frances A. Tylavsky, Julia Krushkal

Journal:

Chemistry & Biodiversity

Year:

2012

Language:

english

File:

PDF, 134 KB

english, 2012

5

Association Between Paternally Inherited Haplotypes Upstream of the Insulin Gene and Umbilical Cord IGF-II Levels

Adkins, Ronald M, Fain, John N, Krushkal, Julia, Klauser, Chad K, Magann, Everett F, Morrison, John C

Journal:

Pediatric Research

Year:

2007

Language:

english

File:

PDF, 279 KB

english, 2007

6

SCLC-CellMiner: A Resource for Small Cell Lung Cancer Cell Line Genomics and Pharmacology Based on Genomic Signatures

Tlemsani, Camille, Pongor, Lorinc, Elloumi, Fathi, Girard, Luc, Huffman, Kenneth E., Roper, Nitin, Varma, Sudhir, Luna, Augustin, Rajapakse, Vinodh N., Sebastian, Robin, Kohn, Kurt W., Krushkal, Julia

Journal:

Year:

2020

File:

PDF, 7.93 MB

2020

7

Parental ages and levels of DNA methylation in the newborn are correlated

Ronald M Adkins, Fridtjof Thomas, Frances A Tylavsky, Julia Krushkal

Journal:

BMC Medical Genetics

Year:

2011

Language:

english

File:

PDF, 343 KB

english, 2011

8

Genome-wide linkage analyses for hypertension genes in two ethnically and geographically diverse populations

Sharon L.R Kardia, Laura S Rozek, Julia Krushkal, Robert E Ferrell, Stephen T Turner, Richard Hutchinson, Andrew Brown, Charles F Sing, Eric Boerwinkle

Journal:

American Journal of Hypertension

Year:

2003

Language:

english

File:

PDF, 63 KB

english, 2003

9

Racial differences in gene-specific DNA methylation levels are present at birth

Ronald M. Adkins, Julia Krushkal, Frances A. Tylavsky, Fridtjof Thomas

Journal:

Birth Defects Research Part A: Clinical and Molecular Teratology

Year:

2011

Language:

english

File:

PDF, 131 KB

english, 2011

10

Alpha-adrenergic receptor gene polymorphisms and cardiovascular reactivity to stress in Black adolescents and young adults

Robert M. Kelsey, Bruce S. Alpert, Mary K. Dahmer, Julia Krushkal, Michael W. Quasney

Journal:

Psychophysiology

Year:

2012

Language:

english

File:

PDF, 210 KB

english, 2012

11

Evolutionary history of orthopoxvirus proteins similar to human complement regulators

Emily Ciulla, Andrea Emery, Dina Konz, Julia Krushkal

Journal:

Year:

2005

Language:

english

File:

PDF, 133 KB

english, 2005

12

Small cell lung carcinoma cell line screen of etoposide/carboplatin plus a third agent

Teicher, Beverly A., Silvers, Thomas, Selby, Michael, Delosh, Rene, Laudeman, Julie, Ogle, Chad, Reinhart, Russell, Parchment, Ralph, Krushkal, Julia, Sonkin, Dmitriy, Rubinstein, Larry, Morris, Joel,

Journal:

Cancer Medicine

Year:

2017

Language:

english

File:

PDF, 1.11 MB

english, 2017

13

Longitudinal Transcriptional Response of Glycosylation-Related Genes, Regulators, and Targets in Cancer Cell Lines Treated With 11 Antitumor Agents

Krushkal, Julia, Zhao, Yingdong, Hose, Curtis, Monks, Anne, Doroshow, James H, Simon, Richard

Journal:

Cancer Informatics

Year:

2017

Language:

english

File:

PDF, 837 KB

english, 2017

14

Ancient Origin of Human Complement Factor H

Julia Krushkal, Claudia Kemper, Irma Gigli

Journal:

Journal of Molecular Evolution

Year:

1998

Language:

english

File:

PDF, 270 KB

english, 1998

15

Computational prediction of RpoS and RpoD regulatory sites in Geobacter sulfurreducens using sequence and gene expression information

Bin Yan, Cinthia Núñez, Toshiyuki Ueki, Abraham Esteve-Núñez, Marko Puljic, Ronald M. Adkins, Barbara A. Methé, Derek R. Lovley, Julia Krushkal

Journal:

Year:

2006

Language:

english

File:

PDF, 1.06 MB

english, 2006

16

Genome-wide similarity search for transcription factors and their binding sites in a metal-reducing prokaryote Geobacter sulfurreducens

Bin Yan, Derek R. Lovley, Julia Krushkal

Journal:

Year:

2007

Language:

english

File:

PDF, 543 KB

english, 2007

17

Association of maternally inherited GNAS alleles with African–American male birth weight

RONALD M. ADKINS, JULIA KRUSHKAL, EVERETT F. MAGANN, CHAD K. KLAUSER, JOHN C. MORRISON, RISA RAMSEY, GRANT SOMES

Journal:

Pediatric Obesity

Year:

2010

Language:

english

File:

PDF, 126 KB

english, 2010

18

Concerted changes in transcriptional regulation of genes involved in DNA methylation, demethylation, and folate-mediated one-carbon metabolism pathways in the NCI-60 cancer cell line panel in response to cancer drug treatment

Krushkal, Julia, Zhao, Yingdong, Hose, Curtis, Monks, Anne, Doroshow, James H., Simon, Richard

Journal:

Clinical Epigenetics

Year:

2016

Language:

english

File:

PDF, 1.76 MB

english, 2016

19

Molecular Genomic Features Associated with in Vitro Response of the NCIâ60 Cancer Cell Line Panel to Natural Products

Krushkal, Julia, Negi, Simarjeet, Yee, Laura M., Evans, Jason R., Grkovic, Tanja, Palmisano, Alida, Fang, Jianwen, Sankaran, Hari, McShane, Lisa M., Zhao, Yingdong, OâKeefe, Barry R.

Journal:

Molecular Oncology

Year:

2020

File:

PDF, 10.60 MB

2020

20

Comparative genomics ofGeobacterchemotaxis genes reveals diverse signaling function

Hoa T Tran, Julia Krushkal, Frances M Antommattei, Derek R Lovley, Robert M Weis

Journal:

Year:

2008

Language:

english

File:

PDF, 521 KB

english, 2008

21

Computational analysis of the evolution of the structure and function of 1-deoxy-d-xylulose-5-phosphate synthase, a key regulator of the mevalonate-independent pathway in plants

Julia Krushkal, Maxwell Pistilli, Kathryn M Ferrell, Frederic F Souret, Pamela J Weathers

Journal:

Year:

2003

Language:

english

File:

PDF, 506 KB

english, 2003

22

Substitution rates in hepatitis delta virus

Julia Krushkal, Wen-Hsiung Li

Journal:

Journal of Molecular Evolution

Year:

1995

Language:

english

File:

PDF, 485 KB

english, 1995

23

VOSTORG: a package of microcomputer programs for sequence analysis and construction of phylogenetic trees

Zharkikh, Andrey A., Rzhetsky, Andrey Yu., Morosov, Pavel S., Sitnikova, Tatiana L., Krushkal, Julia S.

Journal:

Year:

1991

Language:

english

File:

PDF, 429 KB

english, 1991

24

Interleukin-1 receptor antagonist intron 2 variable number of tandem repeats polymorphism and respiratory failure in children with community-acquired pneumonia*

Patwari, Pallavi P., O’Cain, Peggy, Goodman, Denise M., Smith, Melita, Krushkal, Julia, Liu, Caiquin, Somes, Grant, Quasney, Michael W., Dahmer, Mary K.

Journal:

Pediatric Critical Care Medicine

Year:

2008

Language:

english

File:

PDF, 250 KB

english, 2008

25

Extensive parent-of-origin genetic effects on fetal growth

Ronald M Adkins, Julia Krushkal, Grant Somes, John Fain, John Morrison, Chad Klauser, Everett F Magann

Journal:

BMC Bioinformatics

Year:

2009

Language:

english

File:

PDF, 165 KB

english, 2009

26

Epigenetic Analysis of Neurocognitive Development at 1

Krushkal, Julia, Murphy, Laura E., Palmer, Frederick B., Graff, J. Carolyn, Sutter, Thomas R., Mozhui, Khyobeni, Hovinga, Collin A., Thomas, Fridtjof, Park, Vicki, Tylavsky, Frances A., Adkins, Ronald

Journal:

Behavior Genetics

Year:

2014

Language:

english

File:

PDF, 262 KB

english, 2014

27

The genome sequence ofGeobacter metallireducens: features of metabolism, physiology and regulation common and dissimilar toGeobacter sulfurreducens

Muktak Aklujkar, Julia Krushkal, Genevieve DiBartolo, Alla Lapidus, Miriam L Land, Derek R Lovley

Journal:

BMC Microbiology

Year:

2009

Language:

english

File:

PDF, 1.35 MB

english, 2009

28

Ivacaftor

Krushkal, Julia, Murphy, Laura E., Palmer, Frederick B., Graff, J. Carolyn, Sutter, Thomas R., Mozhui, Khyobeni, Hovinga, Collin A., Thomas, Fridtjof, Park, Vicki, Tylavsky, Frances A., Adkins, Ronald

Journal:

Reactions Weekly

Year:

2014

Language:

english

File:

PDF, 218 KB

english, 2014

29

[IEEE 2008 International Conference on Biomedical Engineering And Informatics (BMEI) - Sanya, China (2008.05.27-2008.05.30)] 2008 International Conference on BioMedical Engineering and Informatics - Genome Regions Involved in Multiple Regulatory Pathways Identified Using GSEL, A Genome-Wide Database of Regulatory Sequence Elements of Geobacter sulfurreducens

Krushkal, Julia, Puljic, Marko, Yan, Bin, Barbe, Jose F., Mahadevan, Radhakrishnan, Postier, Bradley, O'Neil, Regina A., Reguera, Gemma, Leang, Ching, DiDonato, Laurie N., N, Cinthia, Meth, Barbara A.

Year:

2008

Language:

english

File:

PDF, 456 KB

english, 2008

30

Epigenome-wide DNA methylation analysis of small cell lung cancer cell lines suggests potential chemotherapy targets

Krushkal, Julia, Silvers, Thomas, Reinhold, William C., Sonkin, Dmitriy, Vural, Suleyman, Connelly, John, Varma, Sudhir, Meltzer, Paul S., Kunkel, Mark, Rapisarda, Annamaria, Evans, David, Pommier, Yv

Journal:

Clinical Epigenetics

Year:

2020

File:

PDF, 1.62 MB

2020

31

Diversity of promoter elements in aGeobacter sulfurreducensmutant adapted to disruption in electron transfer

Julia Krushkal, Ching Leang, Jose F. Barbe, Yanhua Qu, Bin Yan, Marko Puljic, Ronald M. Adkins, Derek R. Lovley

Journal:

Functional & Integrative Genomics

Year:

2009

Language:

english

File:

PDF, 218 KB

english, 2009

32

Haplotypes of the imprinted insulin gene are associated with size for gestational age and umbilical cord IGF-II levels

Ronald Adkins, Julia Krushkal, Chad Klauser, Everett Magann, Grant Somes, John Fain, John Morrison

Journal:

BMC Bioinformatics

Year:

2008

Language:

english

File:

PDF, 127 KB

english, 2008

33

Proceedings of the Seventh Annual UT-ORNL-KBRIN Bioinformatics Summit 2008

Eric C Rouchka, Julia Krushkal, Daniel Goldowitz

Journal:

BMC Bioinformatics

Year:

2008

Language:

english

File:

PDF, 171 KB

english, 2008

34

THE ANGIOTENSIN CONVERTING ENZYME D/D GENOTYPE IS ASSOCIATED WITH MECHANICAL VENTILATION IN WHITE CHILDREN WITH COMMUNITY ACQUIRED PNEUMONIA

O??Cain, Peggy, Dahmer, Mary, Prasad, Pallavi, Zhang, Qing, Smith, Melita, Krushkal, Julia, Quasney, Michael

Journal:

Pediatric Critical Care Medicine

Year:

2006

Language:

english

File:

PDF, 532 KB

english, 2006

35

Rates of Nucleotide Substitution in Primates and Rodents and the Generation–Time Effect Hypothesis

Wen-Hsiung Li, Darrell L. Ellsworth, Julia Krushkal, Benny H.-J. Chang, David Hewett-Emmett

Journal:

Molecular Phylogenetics and Evolution

Year:

1996

Language:

english

File:

PDF, 86 KB

english, 1996

36

Genome-wide survey for PilR recognition sites of the metal-reducing prokaryote Geobacter sulfurreducens

Julia Krushkal, Katy Juárez, Jose F. Barbe, Yanhua Qu, Angel Andrade, Marko Puljic, Ronald M. Adkins, Derek R. Lovley, Toshiyuki Ueki

Journal:

Year:

2010

Language:

english

File:

PDF, 610 KB

english, 2010

37

Computational Methods for Single-Point and Multipoint Analysis of Genetic Variants Associated with a Simulated Complex Disorder in a General Population

Shoemaker, Christopher A., Pungliya, Manish, Sao Pedro, Michael A., Ruiz, Carolina, Alvarez, Sergio A., Ward, Matthew, Ryder, Elizabeth F., Krushkal, Julia

Journal:

Genetic Epidemiology

Year:

2001

Language:

english

File:

PDF, 968 KB

english, 2001

38

Association of genomewide newborn DNA methylation patterns with maternal and newborn characteristics

Ronald M Adkins, Julia Krushkal, Steven Zeisel, Chandrika Piyathilake, Fran Tylavsky, Grant Somes

Journal:

BMC Bioinformatics

Year:

2010

Language:

english

File:

PDF, 143 KB

english, 2010

39

Genome-wide expression profiling inGeobacter sulfurreducens: identification of Fur and RpoS transcription regulatory sites in arelGsumutant

Julia Krushkal, Bin Yan, Laurie N. DiDonato, Marko Puljic, Kelly P. Nevin, Trevor L. Woodard, Ronald M. Adkins, Barbara A. Methé, Derek R. Lovley

Journal:

Functional & Integrative Genomics

Year:

2007

Language:

english

File:

PDF, 466 KB

english, 2007

40

Hepatitis C Hypervariable Region 1: Association of Reduced Selection Pressure in African Americans with Treatment Failure

Vicki M. Park, Barbara C. Mason, Julia Krushkal, Rongling Li, Caroline Riely, Jaquelyn Fleckenstein

Journal:

Digestive Diseases and Sciences

Year:

2007

Language:

english

File:

PDF, 257 KB

english, 2007

41

Beta-adrenergic receptor gene polymorphisms and cardiovascular reactivity to stress in Black adolescents and young adults

Robert M. Kelsey, Bruce S. Alpert, Mary K. Dahmer, Julia Krushkal, Michael W. Quasney

Journal:

Psychophysiology

Year:

2010

Language:

english

File:

PDF, 305 KB

english, 2010

42

Neonatal DNA methylation patterns associate with gestational age

Schroeder, James W., Conneely, Karen N., Cubells, Joseph F., Kilaru, Varun, Newport, D. Jeffrey, Knight, Bettina T., Stowe, Zachary N., Brennan, Patricia A., Krushkal, Julia, Tylavsky, Frances A., Tay

Journal:

Year:

2011

Language:

english

File:

PDF, 662 KB

english, 2011

43

Phylogenetic Classification of Diverse LysR-Type Transcriptional Regulators of a Model ProkaryoteGeobacter sulfurreducens

Krushkal, Julia, Qu, Yanhua, Lovley, Derek R., Adkins, Ronald M.

Journal:

Journal of Molecular Evolution

Year:

2012

Language:

english

File:

PDF, 1.57 MB

english, 2012

44

Mouse Very-Low-Density-Lipoprotein Receptor (VLDLR) cDNA Cloning, Tissue-specific Expression and Evolutionary Relationship with the Low-density-lipoprotein Receptor

Kazuhiro Oka, Kazumi Ishimura-Oka, Mei-jin Chu, Merry Sullivan, Julia Krushkal, Wen-Hsiung Li, Lawrence Chan

Journal:

Year:

1994

Language:

english

File:

PDF, 937 KB

english, 1994

45

Correlation of gene expression and associated mutation profiles of APOBEC3A, APOBEC3B, REV1, UNG, and FHIT with chemosensitivity of cancer cell lines to drug treatment

Vural, Suleyman, Simon, Richard, Krushkal, Julia

Journal:

Year:

2018

Language:

english

File:

PDF, 1.20 MB

english, 2018

46

Characterizing Regulation of Metabolism in Geobacter sulfurreducens through Genome-Wide Expression Data and Sequence Analysis

Mahadevan, Radhakrishnan, Yan, Bin, Postier, Brad, Nevin, Kelly P., Woodard, Trevor L., O'Neil, Regina, Coppi, Maddalena V., Methé, Barbara A., Krushkal, Julia

Journal:

Omics A Journal of Integrative Biology

Year:

2008

Language:

english

File:

PDF, 4.21 MB

english, 2008

47

Genome Diversity of the TetR Family of Transcriptional Regulators in a Metal-Reducing Bacterial Family Geobacteraceae and Other Microbial Species

Krushkal, Julia, Sontineni, Sreedhar, Leang, Ching, Qu, Yanhua, Adkins, Ronald M., Lovley, Derek R.

Journal:

Omics A Journal of Integrative Biology

Year:

2011

Language:

english

File:

PDF, 6.43 MB

english, 2011

48

GSEL Version 2, an Online Genome-Wide Query System of Operon Organization and Regulatory Sequence Elements of Geobacter sulfurreducens

Qu, Yanhua, Brown, Peter, Barbe, Jose F., Puljic, Marko, Merino, Enrique, Adkins, Ronald M., Lovley, Derek R., Krushkal, Julia

Journal:

Omics A Journal of Integrative Biology

Year:

2009

Language:

english

File:

PDF, 513 KB

english, 2009

49

The NCI Transcriptional Pharmacodynamics Workbench: a tool to examine dynamic expression profiling of therapeutic response in the NCI-60 cell line panel

Monks, Anne, Zhao, Yingdong, Hose, Curtis, Hamed, Hossein, Krushkal, Julia, Fang, Jianwen, Sonkin, Dmitriy, Palmisano, Alida, Polley, Eric C., Fogli, Laura K., Konaté, Mariam M., Miller, Sarah B, Simp

Journal:

Cancer Research

Year:

2018

Language:

english

File:

PDF, 1.55 MB

english, 2018

50

Computational prediction of conserved operons and phylogenetic footprinting of transcription regulatory elements in the metal-reducing bacterial family Geobacteraceae

Bin Yan, Barbara A. Methé, Derek R. Lovley, Julia Krushkal

Journal:

Journal of Theoretical Biology

Year:

2004

Language:

english

File:

PDF, 304 KB

english, 2004

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